Mitochondrial DNA-like sequences in the nucleus (NUMTs)

Nuclear mitochondrial DNA sequences (NUMTs) are common in eukaryotes. Human mtDNA sequences are listed below by their location in the human nuclear genome. Celera Scaffold and GenBank accession numbers are indicated for each NUMT-containing contig. Date of last update: September 29, 2006.

Chromosome Location Celera Scaffold and
GenBank accession numbers
% rCRS similarity mtDNA Location (rCRS: NC_012920)
1p36.3 GA_x5J8B7P0VAE:1..500000
GenBank: AL663100.12
82
81
1123-910
1117-910
1p36.3 GA_x5J8B7P0VAE:4000001..4500000
GenBank: AL356693.37
90
90
2466-2675
2675-2466
1p36.3 GA_x5J8B7P0VAE:1000001..1500000
GenBank: AL139415.10
89
89
8040-8202
8040-8202
1p34.3 GA_x5L2HTVAVSK:8500001..9000000
GenBank: AL513220.9
100
100
8934-9007
8934-9007
1p32 GA_x54KRE9971S:1..3319
AL645730.10
78
78
4666-5022
4608-5022
1p31 GA_x5HB7VCJ5FA:3500001..4000000
GenBank: AC096951.2
89
88
16567-16401
16567-16401
1p13 GenBank: AL627169.8 74 5855-9316
1p22 GenBank: AL117351.12 69
75
71
75
67
70
72
78
72
.
66
68
75
75
77
65
80
88
70
69
67
1721-3106
5566-5892
6841-7680
7863-8246
8688-9191
9921-10579
12032-12340
12586-12653
12639-12875
Other Species:
4572-5438 (NC_001601.1 blue whale mtDNA)
5767-5990 (NC_001601.1 blue whale mtDNA)
7065-7226 (CO2)(NC_001779.1 rhinoceros mtDNA)
4530-4620 (NC_001950 spotted catshark mtDNA)
7753-7826 (NC_001779.1 rhinoceros mtDNA)
7768-7861 (NC_001665.1 rat mtDNA)
7924-8071 (NC_001779.1 rhinoceros mtDNA)
8579-8620 (NC_002009.1 fruit eating bat mtDNA)
8697-8875 (NC_001821.1 armadillo mtDNA)
10915-11904 (NC_001601.1 blue whale mtDNA)
12665-12897 (NC_001602.1 gray seal mtDNA)
1p11 AC022192.3 82
80
74
73
987-1534
15042-15087
5604-6979
9394-10319
1q12 GA_x54KRE8AV33:1..500000
GenBank: AC068398.3
88
74
74
83
6870-6981
9386-10319
5596-6979
987-1526
1q24 GA_x54KRE8EL5L:6500001..7000000
GenBank: AL160059.7
76
77
12143-12536
12143-12536
1q43 GA_x5J8B7NYNCY:4000001..4500000
GenBank: AL590396.13
81
78
70
72
12562-6189
573-6196
12-244
12156-16563
1q43 GA_x5J8B7NYNCY:6500001..7000000
GenBank: AL451068.13
74
71
71
74
9771-14799
14796-15722
14796-15722
9771-14799
2p22 GA_x5L2HTTHY8E:16000001..16500000
GenBank: AC007317
88
88
1124-956
1124-966
2p16 GA_x5L2HTTHY8E:6500001..7000000
GenBank: AC009234
83 6998-6270
6998-6270
2p12 GA_x54KRE9UVK8:5500001..6000000
GenBank: AC007400
90
90
2998-3103
3103-2998
2p11.2 GA_x54KRE9UVK8:12000001..12500000
GenBank: AC013262.7
87
87
8103-7862
8110-7862
2p11.1 to
centromere
GA_x54KRE9YMAP:1..500000
GenBank: AC097374.3
84
74
77
84
85
74
77
.
92
86
987-1511
5624-6973
9394-10138
987-1511
15042-15087
5624-6973
9394-10138
Other Species:
9586-9513(ND3) (NC_002080.1 hedgehog
mtDNA
9640-9747(ND3) (NC_001646 orangutan mtDNA)
2p11.1 (Celera)
2p11.2 (GenBank)
GA_x54KRE9UVK8:13000001..13500000
GenBank: AC098817.3
71
92
85
71
73
85
.
87
92
64
11593-16569
336-404
577-710
11592-16567
334-402
575-708
Other Species:
15964-16011(NC_000934.1 elephant_mtDNA )
15303-15361 (tRNAThr)(NC_001992.1 baboon mtDNA
564-798(Dloop)(AF311721 gibbon mtDNA)
2q13 AC021029.5 74
73
85
9394-10319
5612-6976
987-1511
2q13 GA_x5J8B7P878N:12500001..13000000
GenBank:
NT_005445.2
81
83
85
71
596-6431
16434-16563
16444-60
16434-6431
2q14.1 GA_x5J8B7P878N:9000001..9500000
GenBank:
NT_025657.1
76
74
74
74
75
78
74
74
74
75
13247-13907
12744-13215
11276-12755
9785-11318
8513-9755
8513-9692
9726-9796
9785-11318
11550-12676
12751-13209
13247-13907
2q14.1 AC092107.5 84
75
78
987-1511
5613-6976
9394-10138
2q14.2 GA_x5J8B7P878N:3500001..4000000
GenBank: AC097499.3
79
93
81
74
79
93
78
575-998
206-235
11-76
16295-16563
16402-16563
206-235
577-998
2q21 GA_x5L2HTVCF7A:1..849
GA_x5HB7VCBQU9:1..1119GenBank: AC068137.8
75
83
75
72
76
75
11400-12340
3799-15398
3646-3781
15391-15534
3658-3762
2q21 AC023928.3 78
73
76
88
73
84
5555-6145
5171-5550
575-5176
212-245
16304-16562
11-60
2q21 AC073869.5 74
73
78
75
77
78
10657-15398
10612-10515
6534-6461
6380-10519
3658-6262
15391-15534
2q22 GA_x5L2HTTEENY:37500001..38000000
GenBank:AC013437.8
71
73
80
76
76
80
67
73
71
7754-9764
9841-16565
577-2173
2181-2393
2179-2391
575-2171
11-258
9840-16563
7753-9763
2q22 AC018856.4 75
73
84
71
73<
71
77
88
79
81
10310-9840
9755-8554
8383-8295
8185-7753
10380-15933<
15593-16122
16295-16563<
11-60
575-2139
2179-2319
2q22 AC092156.2 76
76
88
84
73
5171-6145
575-5176
212-245
11-60
16304-16562
2q23.3 AC016147.12
AC068744.2
77
75
84
86
9394-10138
5613-6976
987-1394
4145-4223
2q23 GA_x5L2HTTEENY:33000001..33500000
GenBank: AC069333.8
90
92
2771-2856
2769-2848
2q23 GA_x5L2HTTEENY:31500001..32000000
GenBank: AC105402.5
AC016763.8
98
74
98
73
611-742
16444-16563
611-742
16444-16563
2q23 AC092662.2 81
73
4848-6196
11801-15087
2q32 GA_x5L2HTTEENY:1000001..1500000
GenBank: AC062033.2
80
80
823-1270833-1264
2q34 GA_x54KRE9S8TU:6500001..7000000
GenBank: AC007282.4 and in AC007283.3
75
75
69
68
67
.
69
10412-13131
10412-13131
12427-13617
11705-12323
9495-11610
7241-9066
Other Species:
9743-9441 (NC_001602.1 whale mtDNA
2q34 GA_x54KRE9S8TU:8000001..8500000
GenBank: NT_005229.2
74
78
75
77
77
6944-11067
11082-11341
10897-10790
15585-15497
6424-5769
2q37 GA_x54KRE9T42T:17500001..18000000
GenBank: AC108203.5
AC010735.11
81
91
81
91
2648-2742
890-1048
2648-2742
890-1048
2q37 GA_x54KRE9U2AY:8000001..8500000
GenBank: AC012305.7
81 777-1032
2q37 GA_x54KRE9U2AY:10000001..10500000
GenBank: AC112721.3
79
86
89
95
92
92
91
91
86
84
82
84
74
89
91
92
91
92
92
92
91
92
89
92
89
73
74
13246-13587
13048-13130NN
13048-13103
13059-13103
13048-13103
13049-13103
13048-13103
13048-13103
12989-13103
12568-12683
12143-12333
11913-11982NN
13048-14229
13048-13103
13048-13103
13048-13103
13048-13103
13048-13103
13048-13103
13048-13103
13048-13103
13048-13103
13048-13103
13048-13103
13048-13103
13049-13103
11797-13103
10087-10319
3p21 AC027471.3 75
79
10152-10319
9485-9991
3p21 GA_x54KREA3PFF:2500001..3000000
GenBank: AC092796.2
79
79
10428-10598
10394-10643
3p11 GA_x54KREACQDQ:2500001..3000000
GenBank: AC104435.2
82
9137-9366
3p11 GA_x54KREACQDQ:6500001..7000000
GenBank: AC096922.2
100
84
96
81
83
96
81
100
12612-12640
3058-3217-> contiguous to next
->4354-4429
16086-16124
3058-3216
4354-4429
16086-16146
12612-12640
3q11.1 GA_x54KREA92UK:500001..1000000
GenBank: NT_022497.2
72 6027-9316
3q11.1 GA_x54KREA9LET:2500001..3000000
GenBank: AC024033.4
AC106717.2
97
84
94
84
(NNN)2583-2718
6535-6679
1396-2718
6535-6683
3q12 GA_x5HB7VCG0V5:18500001..19000000 73
74
78
70
75
74
78
10660-12340
8620-10582
576-858
12464-14370
5975-6204
3601-4816
1020-2048
3q13.3 GA_x5HB7VCG0V5:4500001..5000000
GenBank: AC117472.3
81 7161-7773
3q25 GA_x5L2HTULD24:26500001..27000000
GenBank: AC016920.14
90
83
85
1927-2141
2007-2316
1925-2314
3q26.1 GA_x5L2HTULD24:32000001..32500000
GenBank: AC104629.10
70
74
78
69
72
73
11971-12245
9110-10897
1972-2067
1544-1968
1362-1503
612-1375
3q26.3 GA_x5L2HTULD24:37500001..38000000
GenBank: AC008134.3
86 6708-6931
4p16.2 AL137218.3; AL354697.5 78
78
74
85
9450-10138
9394-10138
5641-5976
987-1511
4p16 GA_x54KREAGLJJ:4500001..5000000
GenBank: AC093846.3
78 4613-5233
4p15.3 GA_x54KREAGLJJ:7000001..7500000
Genbank: AC110758.3
82 13098-13388
4p15.2 AC092436.5 73
73
72
73
11303-12301
9446-11290
11288-12301
9440-11293
4p15.2 GA_x54KREAGLJJ:17500001..18000000
GenBank: AC093854.2
94 2899-3050
4p11 GA_x5J8B7PYEPE:4000001..4500000
GenBank: AC104646.5
96 14981-15073
4q11 GA_x5HB7VD3DQW:4000001..4500000
GenBank: AC097648.2 (4q12-4q13 border)
78
77
79
79
67
77
78
9466-10836
13029-16238NNN
9169-9410
9169-9410
110-426
13029-16569
9466-10836
4q13 GA_x5HB7VD3DJW:8500001..9000000
GenBank: AC114801.4; AC093897.3
77
79
91
84
2090-2472
15116-15197
2225-2456
15116-15174
4q21 GA_x54KREAHVLE:6000001..6500000
GenBank: AF163864
83 2856-3075
4q21 GA_x54KREAHVLE:9000001..9500000
GenBank: AC022317.8
80 2790-3590
4q26 GA_x54KREAHVSH:2000001..2500000
GenBank: NT_031781.1 (and in NT_022790.2)
78
64
68
76
79
78
575-3161
357-456
11-239
16498-16562
16414-16562
575-3161
4q28 GA_x54KREAK5QS:8500001..9000000
GenBank: AC108045.3
85 2008-2388
4q31.3 GA_x5HB7VCDYHN:9500001..10000000
GenBank: AC097526.3
75
77
664-15579
664-15555
4q34 GA_x5HB7VCDYHN:2500001..3000000
GenBank: AC114770.4
93 12250-12417
4q35 GA_x5L2HTUQ8NL:5000001..5500000
GenBank: AC018710.4
84 7625-7773
5p15.3 GA_x5J8B7Q24ES:1500001..2000000
GenBank: AC091967.3
79
79
78
79
6957-7908
6597-7111
6957-7956
6957-7111
5p15.3 GA_x5J8B7Q2FPT:5500001..6000000
GenBank: AC034217.6; AC002087.1
71
70
81
87
87
81
70
71
14164-16569
11-259
596-1087
15978-16024
15978-16024
596-1087
11-259
14164-16569
5p13 GA_x54KREAPDRV:1..929
GenBank: AC021965.3
82
87
6117-6408
6117-15183
5p13 GA_x54KREAR86K:500001..1000000
GenBank: AC109579.1
82 3822-4308
5q13 GA_x5J8B7Q1L5Q:11500001..12000000
GenBank: AC022223.18
93 None in Celera
341-2697
5q14/15 GA_x54KREANY7M:1..500000
GenBank: NT_023290.4
78
76
78
5934-7908
7908-7543
5934-7908
5q14 GA_x54KREANQ9F:2000001..2500000
None in GenBank.
90 12662-12782
5q14.3 GA_x54KREAQK1W:1..551
And:GA_x54KREANNNA:1..551
GenBank: AC013344.4;AC018806.4; AC093311.2
84
84
84
86
86
.
88
15576-16041
15576-16041
8413-8484
12662-16124
12662-16124
Other Species:
7970-8003 (NC_001794.1 wallaroo mtDNA)
5q21 AC112203.2 67
71
13799-14336
14330-16033
5q21 GA_x5J8B7Q1NA9:1..500000
GenBank: AC114285.2
90
90
14658-14829
14658-14829
5q23 GA_x54KREAQM8V:1500001..2000000
GenBank: AC008565
79 383-708
5q31 GA_x54KREAQM8V:4500001..5000000
GenBank: AC026409.4
82
84
128-251
574-1537
5q32 GA_x5HB7VCVS5L:1500001..2000000
Maybe GenBank: AC008670.6
90
93
15186-15487
10269-15487
6p25 AL451141.13; HarborsAF035429.1 and AF134583.1/AL359496.30 76
98
98
98
8692-8495
5804-8384
3914-9755
3914-9755
6p21.2 GA_x54KREAYBCL:23000001..23392619
GenBank: AL731683.11
78
9096-9888
6q16 GA_x54KREB0N5G:3000001..3500000
GenBank: AL078595.12
83
71
4150-4487
15478-15811
6q16 GA_x54KREB0N5G:5500001..6000000
GenBank: AL132766.13
81
85
88
85
6532-6745->
10622-10474->
5521-5622->
8774-8437
(->, contiguous fragments)
6q23 GA_x5L2HTU8439:15500001..16000000
GenBank: AL356774.13
AL137783.12
83
77
83
77
15395-15628
15167-15283
15395-15627
15167-15283
6q25 GA_x54KREAVE16:6500001..7000000
GenBank: AL603908.3
81 7451-11649
6q26 GA_x54KREAVE16:3500001..4000000
GenBank: AL158033.18
85 3163-3380
7p14 GA_x5HB7VCTE59:1..151713
Also partly in GenBank:M11577
74
10657-15398
7p14) GA_x5HB7VC7SEG:500001..1000000
GenBank: AC069285.8;AC115220.1
83
75
76
86
90
76
75
83
3117-3191
3430-8634
8662-11973
8758-8823
15673-15713
8662-11973
3430-8634
3117-3191
7p14 GA_x5L2HTTW8W2:1..4474
GenBank: AC099654.5 (NUMT in intron of XM_094983.1)
74
74
69
88
74
86
9395-13830
8316-15614
15755-16569
11-60
3819-16563
11-60
7p12 GA_x5HB7VCL761:1..500000 GenBank: AC004844.1 91 2418-2574
7q11.1 GA_x5L2HTUEKN6:500001..1000000
GenBank: AC006013
AC093655.4
*The fragment 5385-5415 is not
found in GenBank
83
77
75
78
90
77
83
78
74
7175-7312
7303-7537
11122-11408
11307-11527
*5385-5415
7303-7537
7175-7312
11307-11526
11122-11407
7q11.1 GA_x5L2HTUEKN6:2000001..2500000
GenBank: AC092100.5
70
72
78
74
74
8510-8741
7515-8396
6594-7531
5513-6553
5239-5525
7q31.2 GA_x54KREB2RL0:16000001..16500000
GenBank: AC004112.2
73 13065-16031
7q32 AC004979.1;
AC006362.2 (NUMT in intron of XM_069781)
75
82
81
3292-6623
2740-3300
12562-12731
7q34 GA_x54KREB2R4M:1..1991
GenBank: AC119751.3
78
81
79
76
9471-10138
10149-10234
9485-10138
10149-10319
7q36 GA_x54KREB3J6B:1..500000
GenBank: NT_007772.1
82
75
2740-3300
3292-6623
7q36 GA_x54KREB449V:1500001..2000000
GenBank: NT_007914.8|Hs7_8071
98 1613-1708
7q36 GA_x54KREB44CJ:500001..1000000
GenBank: U66061
NT_023640.7
70
83
71
83
11-243
576-3098
11-243
574-3096
</td
8q12 AC022861.4 73
73
71
86
88
.
74
8510-9827
11220-14157
13552-16569
11-60
334-367
Other species
10659-13559 (NC_000845.1 pig mtDNA)
8p11.2 AL355484.10 75
78
13931-14460
14675-16024
8p11.2 GA_x5L2HTU51L1:20000001..20500000
GenBank: NT_007995.8
77
70
75
87
16469-16571
11-5077
5091-5721
12258-12341
8p11.1 GA_x5L2HTU51L1:23500001..24000000
GenBank: AC124073.9
77 13931-16024
8p21 GA_x5L2HTU51L1:7500001..8000000
GenBank: AC022559.12
84 8666-8876
8p22 GA_x5L2HTU51L1:6000001..6500000
GenBank: AC087821.5
79 14793-15243
8p23 GA_x54KRE87YE8:1..347845
GA_x54KREB9DLL:1..184161
May be GenBank: NT_008292.9
87
87
88
782-637
782-637
782-637
8q11.1 GA_x5L2HTV532K:500001..1000000
GenBank: NT_023678.7|Hs8_23834
75
78
77
71
4247-5134
568-3480
576-684-> contiguos to next
->14346-239
8q12 GA_x5L2HTV532K:21500001..22000000
GenBank: AC022861.4
73
74
71
8510-9827
10659-13559
13553-367
8q13 GA_x5L2HTV532K:30500001..31000000
GenBank: NT_008055.8|Hs8_8212
86
83
86
1524-1734
8422-8459
1524-1734
8q13 GA_x5L2HTV532K:30000001..30500000
GenBank: NT_008055.8|Hs8_8212
81 2288-2663
8q13 GA_x5L2HTV532K:26500001..27000000
GenBank: AC022893.6
86 625-782
8q22 GA_x5HB7VCY1B9:13500001..14000000
GenBank: AC026827.6
98 14861-14944
8q23
8q22
GA_x5HB7VCY1B9:17000001..17500000
GenBank: NT_008136.2
71
69
69
81
75
70
71
16457-16565
583-2342

2467-4370
4366-4481
5517-5960
6095-7325
7449-7736

8q23 GA_x5L2HTU3MBV:1..500000
GenBank: AP002980.2
82
78
15008-15225
16414-16563
8q24.3 GA_x54KREBBWRK:11500001..12000000
GenBank: AC090821.13
83
76
5511-6214
4859-6678
9p24 GA_x5L2HTUGAQ2:24500001..25000000
GenBank: NT_008413.8|Hs9_8570
69
76
73
74
88
13724-14701
1288-7947
7972-9891
9882-13588
15281-15315
9p24.3 AL591968.4; AL512605.13 100
79
6225-6420
3757-3891
9p12 GA_x5L2HTTPM0J:1..500000
[And GA_x54KRE8WC29:1..123045 and
GA_x5L2HTUTQDW:1.191478 and GA_x5HB7VD8UY6:4500001..4887684 and GA_x5HB7VD8UY6:3000001..3500000]
GenBank: AL355377.25; AL356489.14; AL139113.21
71
83
77
71
84
73
11-235
574-3096
16193-16479
11-235
574-3096
15515-15774
9q21 GA_x5L2HTVCTL9:3000001..3500000
GenBank: AL390788.15
76
77
7506-7573
7505-7572
9q21 GA_x5L2HTVCTL9:5000001..5500000
GenBank: AL160267.17(NUMT in intron of XM_095995.3); AL592047.10
76
81
73
76
76
81
73
90
80
4397-6215
583-1010
16306-60
4613-6990
4396-6214
581-1008
16304-16569
11-60
3811-3920
9q21 GA_x5L2HTVCTL9:5500001..6000000
May correspond in GenBank to: AL160278.24
74
75
13856-14352
13856-14352
9q22 GA_x5L2HTTPLFK:2500001..3000000
GenBank: AL157827.17;
AL354751.7 {mtDNA insertion comprises
most of the 2nd intron of the gene XM_011798.1}
79
79
76
73
5443-6016 [contains a (G)nt/a X 5 insert]
5443-6016
9109-9888
9880-11699
10p15 GA_x54KRE8JUR1:2000001..2500000
GenBank: AL354747.12
80 13002-13184
10p13 AL353147.10 78
76
74
2305-2844
3226-3515
4179-5306
10p12 GA_x5L2HTTFEJ9:6000001..6500000
GenBank: AL139404.9
88 2515-2659
10p12 GA_x5L2HTTFEJ9:13000001..13500000
GenBank: AL353147.10
74
76
78
4179-5306
3226-3515
2305-2844
10p11.1 GA_x54KRE8L8BD:1..500000
GenBank: AC018684.3; AL121927.24
77
80
77
82
1721-3875
1345-1459
1721-3875
12818-13577
10p11.1 GA_x54KRE8L8DP:3500001..4000000
GenBank: AL590730.6
75
74
NNN12074-13949
11669-13949
10q11.1 GA_x39G1FFS6TE:1..1218
GenBank: AC024235.3
80
79
9485-10125
9485-10138
10q23 GA_x5J8B7Q1L3K:1..133998
GenBank: AF227907.1
81
85
80
82
85
4064-11117
14328-14580
14360-16569
1-11116
14327-14582
10q22 GA_x5L2HTUSATD:2500001..3000000
GenBank: NT_025827.1
75
70
72
3294-4489
4624-5373
5512-9035
10q25 GA_x5HB7VCTE6R:12500001..13000000
GenBank: AL441886.18
84
8295-8809
10q26 or10q11.23 GA_x5L2HTVF5SB:1..25969 and
GA_x5L2HTVEPJC:1..2306
GenBank: AC074322.4
74
84
78
76
78
84
76
80
1450-2482
11-60
575-1281
11-245
577-1283
11-60
575-2817
2801-3165
11 AC000382.1 83
74
78
987-1511
5613-6976
9386-10138
11p15 GA_x5L2HTTV9VQ:5000001..5500000
GenBank:AC021914.7
94
90
93
523-728-NNN
2828-2974
521-2972
11p12 GA_x5L2HTTV9VQ:34500001..35000000
GenBank: AC027806.8
77 6919-7745
11p11.1 GA_x54KRE8RWR0:1000001..1500000
GenBank: AC018410.24
86 13225-13452
11q13 GA_x54KRE8TKVU:1500001..2000000
GenBank: AP001104.4;AP000763.4;
AP002789.3;
AP000676.5
92
76
92
84
82
66
74
6642-6804
15892-16031
6642-6804
10822-10897
596-1163
15864-16475
14414-15867
11q13 GA_x54KRE8TL24:4000001..4500000
GenBank: AP002783.3
73
73
9820-15567
9820-15567
11q22 GA_x54KRE8WCAA:13500001..14000000
GenBank: AP003461.2
75
75
575-9745
575-9745
11q23 GA_x54KRE8WCAA:6000001..6500000
GenBank: NT_009151.8|Hs11_9308
89
86
15475-15611
15453-15612
11q25 GA_x54KRE8WCJ9:3500001..4000000
GenBank: AP003040.2 AP000926.5
94
72
94
72
14660-14741
15391-15833
14660-14741
15391-15833
12 AC078877.9 76
74
10149-10319
10031-10138
12p12 GA_x54KRE902N0:15000001..15500000
GenBank: AC092862.12
90 1722-1826
12q11 GA_x54KRE91FD8:8500001..9000000
GenBank: AC018698 AC073607.19
73
100
73
98
3605-5069
3791-3879
3605-5069
3791-3879
12q12 GA_x54KRE91FD8:1..500000
GenBank: AC131157.4
84
4251-4423
12q24.3 GA_x5L2HTV8TDQ:1500001..2000000
GenBank: NT_009482.8|Hs12_9639
84
12142-12344
13q12 GA_x5HB7VCN3FD:16000001..16500000
GenBank: AL157694.7
85 4210-4415
13q14 GA_x5HB7VCN3DA:7000001..7500000
GenBank: AC006442.1 ; AL353657.26
90
89
68
.
71
2898-3071
2898-3071<br8002-8369
Other Species:
7250-7446 (NC_001941.1 sheep mtDNA)
13q14 GA_x5HB7VCN3DA:7500001..8000000
GenBank: AL138997.18
91
91
5108-5230
5108-5230
13q21 GA_x5L2HTU7TGA:1..2170
GenBank: AC024975.2
84
84
75
77
78
76
1019-1507
1507-1019
6976-6080
5980-5613
9394-10126
10163-10302
13q21 GA_x5HB7VCN3DA:9500001..10000000
GenBank: AL390722.10
81
81
13012-13177
13012-13177
13q21 GA_x5HB7VCN3QP:10500001..11000000
GenBank: AL137244.28
85
84
9874-10039
9874-10039
13q31 AL445195.4 70
70
70
70
11042-12783
12787-14300
12787-14300
11042-12783
13q32 GA_x54KRE96ECP:9000001..9500000
GenBank: AL138955.14
78
71
78
71
13051-13337
13327-60
13051-13337
13327-16560
13q34 GA_x54KRE96ECP:23000001..23500000
GenBank: AL138816.12; AL160158.10; AL160031.9
99
99
1115-1237
982-1237
14q11.1 AJ238393.1 87 2011-2079
14q22 GA_x5L2HTU0SRS:53000001..53500000
GenBank: AL122125.4
83 574-920
14q31 AC021835.3 76
69
74
75
79
14922-15411
14333-14715
12427-14298
11352-12333
1796-3314
14q32 GA_x5L2HTU0SRS:21000001..21500000
GenBank: AL355887.4
77
77
577-2364
575-2350
15q13 GA_x5L2HTUCKNG:5500001..6000000
GenBank: AC025429.6
75 11687-13134
15q15 GA_x5L2HTUCKTJ:2500001..3000000
GenBank: AC022467.7 and AC091074.3
80
76
80
12980-13184
13205-13292
12980-13184
15q21 GA_x5L2HTUCKTJ:14000001..14500000
GenBank: AC025916.5 andAC066616.6
73
75
73
87
85
86
73
75
73
9615-11019
11231-12237
12465-16016
11366-11418
5297-5334
11366-11418
9614-11019
11231-12237
12465-16016
16p13.3 GA_x5L2HTVF6CQ:8000001..8500000
GenBank: NT_010530.8|Hs16_10687
74
75
74
8514-13708
14492-16030
8514-16030
16p13.3 GA_x5L2HTVF6CQ:500001..1000000
GenBank: NT_010577.2
76
76
78
83
77
77
85
82
86
5856-7684
2828-4596
2197-2819
2112-2211
7683-5856
4615-2895
2817-2427
2209-2110
2685-2427
16p13.3 AC024953 100
84
1272-1342
3011-3069
16p13.1 GA_x5L2HTV7HJN:500001..742907
GenBank: NT_031896.1|Hs16_32067
75 12221-13575
16p12 AC007595.7 74
75
.
71
8513-13707
14491-16029
Other Species:
15508-15618 (NC_001992.1 baboon mtDNA)
16p11.1 GA_x54KRE99UHB:500001..1000000
GenBank: AC026474.6
80 12197-12370
16q22
16q23
GA_x54KRE9B9GJ:5500001..6000000
GenBank: AC009140.6
79
86
72
14435-16562
11-60
13930-16562
17 AC091085.2 79
74
83
9386-10138
5613-6976
987-1511
17p11.2 GA_x5HB7VCTDR9:1..17488
GA_x9V1A74:1..1215
[and GA_x5L2HTVDBJD:1..932;
GA_x5J8B7Q1AL2:1..932;
GA_x5HB7VCSLWB:1..932,
99% sim to
Hs17_25018]
GenBank: NT_024862.13; AC107940.13
85
74
78
83
85
81
85
83
80
87
83
87
14360-15163
16019-480
16304-480
16376-447
16376-447
6518-11116
14327-14582
14360-14528
14365-458
573-1560:
1592-11112:
14582-14327
17p11.2 GA_x54KRE9GCSG:500001..1000000
GenBank: AC025627.13
7783
78
78
81
73
75
80
80
80
81
77
77
77
6392-4942
4887-4626
4595-3261
2340-2084
2097-11
11797-11897
16402-16563
575-2097
2087-2665
2656-3270
3261-4595
4626-4887
4984-6392
17p11.2 AC005722.1 82 11834-11897
17p11.2 AC003957.1 79
86
8716-8846
8795-8846
17q11.2 GA_x9V1AYL:1..500000 also in:
GA_x5L2HTTED7M:1..456335
GenBank: AC004134
79
79
89
2265-2601
2267-2603
2418-2594
17q21 GA_x9V1AR7:500001..1000000
GenBank: AC023855.15
97
10143-10210
17q21 GA_x9V1B0T:6500001..70000
00
GenBank: AC073480; AC025505.11
97
96
82
6818-6909
6818-7470
12265-12339
18p11.3 GA_x5HB7VCPGRD:2500001..3000000
GenBank: AP000919.6
90
93
14381-14536
14536-14381
18q12 GA_x54KRE9MHP4:500001..1000000
GenBank: AP001386.3
96
97
7975-8166
7975-8166
18q21 GA_x54KRE9MHP4:14500001..15000000
GenBank: AC105183.8
83
83
963-1281
963-1281
19p13.2 AC008758.7;AC012618.7; AC022415.5
80
84
71
73
81
73

76
73

.
87
80
77
72
5343-5427
6888-6937
7971-8221
8791-9277
4303-4243
3903-3660
4480-4215
2748-2536
Other Species:
7243-7414 (NC_001821.1 armadillo mtDNA)
3535-3653 (NC_002080.1 hedgehog mtDNA)
4285-4389 (NC_001779.1 rhinocerus mtDNA)
2703-2899 (NC_000884.1 guinea pig mtDNA)
19q13.4 GA_x54KRE9RQ87:1500001..2000000
GenBank: AC044792.6
83
75
12143-12337
11917-12337
20q13.3 GA_x5L2HTTW9JV:5000001..5500000
GenBank: AL109955.38
AL117380.28
83
77
90
78
79
88

92
11-60
573-4281
12962-13038
2682-987
945-573
60-11
12962-13031
21 AC027762.2 78
76
9470-10128
10163-10302
21q22 GA_x5J8B7P9YMR:3500001..4000000
GenBank: AL163302.2
87
88
5995-6188
6188-5995
22q13 GA_x39G1F6QCNE:1..500000
GenBank: AL022327.17
80
79
667-898
692-898
Xp22.3 GenBank: AC119041.6 76 14074-16005
Xp22.3 GA_x5J8B7PLWN9:1000001..1500000
GenBank: AC112497.4
83
83
6679-6501
6691-6501
Xp22.33 AC021859.4 75
86
14074-16005
15990-16030
Xp11.2 AL020991.1 87 2707-2613
Xp11.2 GA_x5J8B7PE4U0:1..500000
GenBank: Z83821.1; AL158819.14; AL590240.5
80
88
87
78
77
576-6407
2615-2701
2707-2613
5661-576
6406-5576
Xp11.2-Xq21 NT_011669.16 73
76
83
72
80
76
74
74
77
80
73
74
76
78
813-1506
1893-2119
2445-2699
2801-3979
4381-4481
4567-4687
15713-15575
15336-14775
14633-14415
13589-13477
13400-12750
12644-12523
12339-11947
11766-11656
Xq25 AL391375.11 85
80
75
703-575
16569-16402
16009-14685
Xq26.1 GA_x39G1FU7W5T:1..260539
GenBank: AL359973.11;
70
87
93
96
93
14685-245-(CACG)12
574-703
6553-7302
953-687
10606-11159
Xq21-Xq28 GenBank: NT_011786.15 93
96
93
75
80
85
80
74
81
74
75
95
6553-7302
953-687
10606-11159
14685-16009
16402-16569
575-703
11471-11543
683-2216
2418-2699
2907-3749
3925-4423
11119-11075
Yp11.3 GA_x5L2HTV86JQ:1..970
AC010905.3
100
100
1272-1342
1342-1272
Yp11.2 AC025731.12 74
80
77
74
84
14422-15348
16501-16562
596-1172
1166-3458
4265-4477
Yp11.2 GA_x5L2HTTS0UA:1..1112 andGA_x54KREA67C8:1..810
GenBank: AC009952.4
100
100
100
6499-6564
6499-6564
6499-6564

1. Many contig positions are listed in the Supplemental material of Mishmar, D., Ruiz-Pesini, E., Brandon, M., and Wallace, D.C. 2004. Mitochondrial DNA-like sequences in the nucleus (NUMTs): insights into our African origins and the mechanism of foreign DNA integration. Human Mutation 23(2):125-133. All contig positions will be listed in the next upgrade of the database.

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Topic revision: r3 - 25 Feb 2011 - 21:32:39 - MarieLott
 
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