Backlinks to Variants in MITOMAP Web (Search all webs)
Results from MITOMAP web retrieved at 12:07 (GMT)
AllVariants
All Current Variants A summary of counts and frequencies generated dynamically from Mitomap's current sequence set Execute Search: : View all variants in Mitom...
NEW - 02 Apr 2018 - 17:17 by MarieLott
BA1BS1Summary
ClinGenApproved Summary of Variants Meeting ClinGen Approved Frequency Criteria for BA1 and BS1 .data th, .data td { border: 1px solid #CCC; padding: 5px; }...
NEW - 20 Apr 2024 - 05:16 by UnknownUser
Benign
ClinGenApproved Variants Meeting ClinGen Approved Frequency Criteria for BA1 and BS1 BA1 ( = 1%), total: 458 (Benign: 458); BS1 (0.5 Report date: 2024 04 20 F...
NEW - 20 Apr 2024 - 05:16 by UnknownUser
BenignTBD
ClinGenApproved Variants Meeting Frequency Criteria for BA1 and BS1 but Queued for Deeper Curation(currently not classified or classified as VUS) BA1 frequency ( ...
NEW - 20 Apr 2024 - 05:16 by UnknownUser
ClinGenApproved
ClinGenApproved Variants Meeting ClinGen Approved Frequency Criteria for BA1 and BS1 BA1 ( = 1%), total: 458 (Benign: 458); BS1 (0.5 Report date: 2024 04 20 F...
NEW - 20 Apr 2024 - 05:16 by UnknownUser
ClinGenApproved-2021-01-15
ClinGenApproved Variants meeting ClinGen approved frequency criteria for BA1 and BS1 BA1 ( = 1%), total: 555 (Benign: 555); BS1 (0.5 Report date: 2021 07 09 l...
NEW - 16 Jul 2021 - 14:14 by UnknownUser
ClinGenApproved-V1
ClinGenApproved Variants meeting ClinGen approved frequency criteria for BA1 and BS1 BA1 ( = 1%), total: 528 (Benign: 528); BS1 (0.5 Report date: 2021 05 19 l...
NEW - 19 May 2021 - 15:07 by UnknownUser
ClinGenApproved1
ClinGenApproved Variants meeting ClinGen approved frequency criteria for BA1 and BS1 BA1 ( = 1%), total: 530 (benign: 530); BS1 (0.5 Report date: 2021 05 18 l...
NEW - 18 May 2021 - 16:20 by UnknownUser
ClinGenApproved2
ClinGenApproved Variants Meeting ClinGen Approved Frequency Criteria for BA1 and BS1 BA1 ( = 1%), total: 552 (Benign: 552); BS1 (0.5 Report date: 2022 11 03 l...
NEW - 04 Nov 2022 - 00:17 by UnknownUser
ClinGenApprovedOld
ClinGenApproved Variants meeting ClinGen approved frequency criteria for BA1 and BS1 BA1: = 1%, total: 414; BS1: 0.05 Report date: 2020 07 02 loading data......
NEW - 22 Jan 2021 - 15:37 by UnknownUser
ClinicalPhenotypes1
Clinical Phenotypes (non LHON) Associated with mtDNA Polypeptide Gene Mutations Reported in the Literature Syndromes Locus Disease* Allele ...
NEW - 15 Sep 2015 - 10:00 by UnknownUser
ClinicalPhenotypesPolypeptide
Reported Mitochondrial DNA Polypeptide Gene Disease Mutations, Non LHON Last update: March 2012 Panel A: The Top Pathogenic mtDNA Polypeptide Missense Mutations, ...
NEW - 17 Nov 2015 - 13:59 by UnknownUser
ClinicalPhenotypesRNA
Clinical Phenotypes Associated with mtDNA rRNA tRNA Mutations, Non LHON Last update: March 2012 The Top mtDNA Protein Synthesis (rRNA tRNA) Gene Mutations Sy...
NEW - 17 Nov 2015 - 13:59 by UnknownUser
ConfirmedCriteria
Criteria for Assessment of Variant Pathogenicity For Mitomap to assign a status of "Cfrm" to a possibly pathogenic variant, we look for confirming reports which a...
r2 - 18 Sep 2019 - 23:30 by MarieLott
ContinentVariants
MITOMAP: Common Continent Specific mtDNA Variants Last Edited: Jun 01, 2003 th { text align: center; } #gb footer { font size: 12px; } .mark { color: red...
r696 - 20 Apr 2024 - 05:11 by ShipingZhang
ContinentVariantsIE
MITOMAP: Common Continent Specific mtDNA Variants Last Edited: Jun 01, 2003 Haplogroup Continent mtDNA Variants Continental mtDNA "AFRICA","L","3592 Hp...
r696 - 20 Apr 2024 - 05:11 by ShipingZhang
ContinentVariantsTemplate
MITOMAP: Common Continent Specific mtDNA Variants Last Edited: MM:EditDate:MM Haplogroup Continent mtDNA Variants Continental mtDNA MM:TableData:MM Note...
NEW - 15 Sep 2015 - 10:00 by UnknownUser
DeletionsSingle
MITOMAP: Reported mtDNA Deletions Last Edited: Mar 21, 2024 th { text align: center; } #gb footer { font size: 12px; } .mark { color: red; } #gb footer ....
r692 - 20 Apr 2024 - 05:01 by ShipingZhang
DeletionsSingleIE
MITOMAP: Reported mtDNA Deletions Last Edited: Mar 21, 2024 Deletion Junction (nt:nt) Deletion Size (bp) Repeat Location (nt) Repeat Type More Info "1...
r692 - 20 Apr 2024 - 05:01 by ShipingZhang
DeletionsSingleTemplate
MITOMAP: Reported mtDNA Deletions Last Edited: MM:EditDate:MM Deletion Junction (nt:nt) Deletion Size (bp) Repeat Location (nt) Repeat Type More Info ...
NEW - 15 Sep 2015 - 10:00 by UnknownUser
GBFreqInfo
GenBank Frequency Information The current GenBank frequency data in our variant tables is derived from 61,134 human mitochondrial DNA sequences with size greater ...
r24 - 01 Feb 2024 - 19:49 by UnknownUser
GBFreqInfo-2019-05-01
GenBank Frequency Information The current GenBank frequency data in our variant tables is derived from 48,882 human mitochondrial DNA sequences with size greater ...
NEW - 16 Dec 2020 - 21:43 by UnknownUser
GBFreqInfo-2021-01-15
GenBank Frequency Information The current GenBank frequency data in our variant tables is derived from 51,836 human mitochondrial DNA sequences with size greater ...
NEW - 16 Jul 2021 - 14:15 by UnknownUser
GBFreqInfo-2022-01-15
GenBank Frequency Information The current GenBank frequency data in our variant tables is derived from 54,594 human mitochondrial DNA sequences with size greater ...
NEW - 28 Jan 2022 - 18:49 by UnknownUser
GenbankInfo
2021 Update #1: On Jan 15, 2021 we added 164 new full length (FL) and 206 new control region (CR) GenBank sequences to our database. This brings our total number ...
NEW - 29 Jan 2021 - 23:16 by UnknownUser
GenbankUpdate
2024 Update #1: On January 16, 2024 we added 566 new full length (FL) and 830 new control region (CR) GenBank sequences to our database. However, we also increase...
NEW - 01 Feb 2024 - 19:12 by UnknownUser
HaplogroupMarkers
To search this page for a position of interest, use your browser's search function, Ctrl F (Windows) or ? Command F (Mac). Report date: 2023 06 15 Top Level ...
r29 - 15 Jun 2023 - 06:18 by UnknownUser
HaplogroupMarkersLtrNumLtr
Download data Markers Found at 80% in Haplogroups (Ltr Num Ltr Level) Data retrieved from sequences collected from Genbank on 2024 1 26Number of unique vari...
r8 - 27 Jan 2024 - 14:33 by UnknownUser
HiFreqHGcalc
High Frequency Haplogroup (HFHG) Flags: Calculation Criteria For full length (FL) or control region (CR) sequences, the following conditions are applied to fla...
r13 - 21 Jun 2023 - 00:19 by UnknownUser
HumanMitoReport
The Report of the Committee on the Human Mitochondrial Genome Adapted from the original print report: Wallace DC, Lott MT, Brown MD, Huoponen K, Torroni A 1995. R...
NEW - 15 Sep 2015 - 10:00 by UnknownUser
Indels
th, td { padding: 3px; border: solid 1px #CCC; } th { text align: center; } .even { background: #EEE; } Indel Variants Converted to Comply with HG...
NEW - 27 Jan 2024 - 14:33 by UnknownUser
LargeDeletions
Bibliography: Large Deletions in the Human mtDNA Abnet, C. C., Huppi, K., Carrera, A., Armistead, D., McKenney, K., Hu, N., Tang, Z. Z., Taylor, P. R. and Dawsey,...
r3 - 08 Nov 2019 - 20:16 by MarieLott
MissingVariants
Patched Variants Index ID Position Refna Regna AlleleType NAChange AAChange Locus Phenotype Ethnicity 1 20100804015 896 A G polymorphism A G rRNA MT RNR1 2 201105...
NEW - 18 Oct 2022 - 17:47 by UnknownUser
MitoSeqs
Complete Mitochondrial DNA Sequences The revised Cambridge Reference Sequence (rCRS) is GenBank number NC_012920. Please use this new number when citing the rCRS ...
NEW - 21 Jun 2023 - 00:19 by UnknownUser
MitoSeqsBak
Complete Mitochondrial DNA Sequences The revised Cambridge Reference Sequence (rCRS) is GenBank number NC_012920. Please use this new number when citing the rCRS ...
r32 - 20 Feb 2020 - 18:10 by MarieLott
MitoSites
MitoSites Mitochondrial Resources on the Web C. elegans Mitochondrial Directory (UK) Complex I Database (Scripps) DNA Polymerase Gamma Mutation Database EMPOP Co...
NEW - 15 Sep 2015 - 10:00 by UnknownUser
MitoTipInfo
MitoTIP An in silico tool for predicting pathogenicity of novel mitochondrial tRNA variants, developed by Neal Sondheimer and Sanjay Sonney (http://journals.plos....
r30 - 21 Jun 2023 - 00:19 by UnknownUser
Mitobank
MITOBANKMitochondrial DNA Sequences To submit unpublished mtDNA variant data to an online database, please contact lishen #64;chla.usc.edu at MSeqDR. To submit se...
r22 - 21 Jun 2023 - 00:19 by UnknownUser
MutationsCodingControl
MITOMAP: Reported Mitochondrial DNA Base Substitution Diseases: Coding and Control Region Point Mutations Last Edited: Apr 17, 2024 The GB frequency data in Mitom...
r720 - 20 Apr 2024 - 05:02 by ShipingZhang
MutationsCodingControlCfrm
MITOMAP: Mitochondrial DNA Base Substitution Diseases:Coding and Control Region Point Mutations with Cfrm Status Last Edited: Apr 17, 2024 For Mitomap to assign a...
r584 - 20 Apr 2024 - 05:01 by ShipingZhang
MutationsCodingControlCfrmIE
MITOMAP: Mitochondrial DNA Base Substitution Diseases:Coding and Control Region Point Mutations with Cfrm Status Last Edited: Apr 17, 2024 For Mitomap to assign a...
r582 - 20 Apr 2024 - 05:01 by ShipingZhang
MutationsCodingControlCfrmTemplate
MITOMAP: Mitochondrial DNA Base Substitution Diseases:Coding and Control Region Point Mutations with Cfrm Status Last Edited: MM:EditDate:MM For Mitomap to assign...
NEW - 21 Jun 2023 - 00:19 by UnknownUser
MutationsCodingControlIE
MITOMAP: Reported Mitochondrial DNA Base Substitution Diseases: Coding and Control Region Point Mutations Last Edited: Apr 17, 2024 The GB frequency data in Mitom...
r720 - 20 Apr 2024 - 05:02 by ShipingZhang
MutationsLHON
DIV.Section1 { page: Section1 } Leber's Hereditary Optic Neuropathy (LHON) Disease Mutations A. "Top 19" Primary LHON mutations, the first 3 mutations listed...
r6 - 19 Mar 2018 - 17:18 by MarieLott
MutationsRNA
MITOMAP: Reported Mitochondrial DNA Base Substitution Diseases: rRNA/tRNA mutations Last Edited: Apr 17, 2024 The GB frequency data in Mitomap is derived from 61...
r716 - 20 Apr 2024 - 05:11 by ShipingZhang
MutationsRNACfrm
MITOMAP: Mitochondrial DNA Base Substitution Diseases:rRNA/tRNA Mutations with Cfrm Status Last Edited: Apr 17, 2024 For Mitomap to assign a status of "Cfrm" to a...
r584 - 20 Apr 2024 - 05:11 by ShipingZhang
MutationsRNACfrmIE
MITOMAP: Mitochondrial DNA Base Substitution Diseases:rRNA/tRNA Mutations with Crfm Status Last Edited: Apr 17, 2024 For Mitomap to assign a status of "Cfrm" to ...
r582 - 20 Apr 2024 - 05:11 by ShipingZhang
MutationsRNACfrmTemplate
MITOMAP: Mitochondrial DNA Base Substitution Diseases:rRNA/tRNA Mutations with Crfm Status Last Edited: MM:EditDate:MM For Mitomap to assign a status of "Cfrm" t...
NEW - 21 Jun 2023 - 00:19 by UnknownUser
MutationsRNAIE
MITOMAP: Reported Mitochondrial DNA Base Substitution Diseases: rRNA/tRNA mutations Last Edited: Apr 17, 2024 The GB frequency data in Mitomap is derived from 61...
r716 - 20 Apr 2024 - 05:11 by ShipingZhang
MutationsRNATemplate
MITOMAP: Reported Mitochondrial DNA Base Substitution Diseases: rRNA/tRNA mutations Last Edited: MM:EditDate:MM The GB frequency data in Mitomap is derived from ...
NEW - 21 Jun 2023 - 00:19 by UnknownUser
NewUpdate
2024 Update #1: On January 16, 2024 we added 566 new full length (FL) and 830 new control region (CR) GenBank sequences to our database. However, we also increase...
NEW - 27 Jan 2024 - 01:14 by UnknownUser
NuclearGenesStructural
Structural Nuclear Genes for Mitochondrial Diseases Last update: January 2018 Complex Name OMIM Function Chromosome Inheritance Clinical Phenotype...
r3 - 17 Jan 2018 - 17:35 by MarieLott
Polymorphisms
MITOMAP: Unpublished mtDNA Variants {ARCHIVED, no longer updated} Also see the submission index Point Mutations includes benign 'potentially pathogenic' var...
NEW - 19 Oct 2022 - 15:26 by UnknownUser
PolymorphismsCodingBlacklistIE
MITOMAP: mtDNA Coding Region RNA Sequence Variants (Blacklist) _Last Edited: , _ The GB frequency data is derived from 2200 GenBank sequences with size greate...
r13 - 08 Mar 2019 - 17:13 by ShipingZhang
ReferenceList
References of Mitochondrial Interest This page is part of Mitomap. Date of last update: 5 January 2023. If you would like to submit published articles to be i...
r6 - 21 Jun 2023 - 00:19 by UnknownUser
ReferenceListAL
References of Mitochondrial Interest (A L) This page is part of Mitomap. Date of last update: 5 January 2023. If you would like to submit published articles t...
r6 - 21 Jun 2023 - 00:19 by UnknownUser
ReferenceListAL_archive
References of Mitochondrial Interest (A L) This page is part of Mitomap. Date of last update: 3 June 2019. If you would like to submit published articles to...
r29 - 03 Jun 2019 - 16:40 by MarieLott
ReferenceListMZ
References of Mitochondrial Interest (M Z) This page is part of Mitomap. Date of last update: 08 December 2022. If you would like to submit published articles...
r6 - 21 Jun 2023 - 00:19 by UnknownUser
ReferenceListMZ_archive
References of Mitochondrial Interest (M Z) This page is part of Mitomap. Date of last update: 29 May 2019. If you would like to submit published articles to...
r28 - 03 Jun 2019 - 16:41 by MarieLott
ReferenceList_archive
References of Mitochondrial Interest This page is part of Mitomap. Date of last update: 18 July 2019. If you would like to submit published articles to be i...
r34 - 18 Jul 2019 - 17:18 by MarieLott
ReportRefs
References cited in The Report of the Committee on the Human Mitochondrial Genome 1a. Anderson, S., Bankier, A.T., Barrell, B.G., de Bruijn, M.H., Coulson, A.R., ...
NEW - 15 Sep 2015 - 10:00 by UnknownUser
SubmitUsingMitomaster
MITOMAP mtDNA Variant Submission New Process * The new process for submitting unpublished human mtDNA variants (point mutations, micro insertions, or micro d...
r2 - 10 Mar 2016 - 16:07 by MarieLott
TestPage
MITOMAP A human mitochondrial genome database A compendium of polymorphisms and mutations of the human mitochondrial DNA The role of MITOMAP is to report...
NEW - 15 Sep 2015 - 10:00 by UnknownUser
ToolLaunchpad
New Tools! Look up Co variantsCompute frequencies of a variant with or without co occurence with another variant. Variant Search, aka "Marker Finder"Searc...
NEW - 21 Jun 2023 - 00:20 by UnknownUser
ToolLaunchpad2019
New Tools! * Variant Search, aka "Marker Finder" Search for variants found at specified frequencies in your choice of haplogroups or lineages originally deve...
r6 - 19 Feb 2020 - 15:05 by MarieLott
ToolLaunchpadBak
New Tools! * Variant Search, aka "Marker Finder" Search for variants found at specified frequencies in your choice of haplogroups or lineages originally deve...
r3 - 19 Feb 2020 - 15:56 by MarieLott
TopVariants
.p80 { background color:#ffff99; } .p50 { background color:#ccffff; } .p25 { background color:#ffebcd; } .head { text align: center; background co...
r18 - 27 Jan 2024 - 14:33 by UnknownUser
TopVariants42616
Report date: 04/02/18 View All Variants Most Frequent Variants in Mitomap ("Top 40") Analysis of 42,616 GenBank sequences, consisting of 5256 lineag...
NEW - 30 May 2018 - 14:56 by MarieLott
TreeBibliography
Bibliography for MITOMAP's Large Phylogenetic Tree 9/25/2006 1, Mishmar D, Ruiz Pesini E, Golik P, Macaulay V, Clark AG, Hosseini S, Brandon M, Easley K, Ch...
NEW - 17 Nov 2015 - 13:59 by UnknownUser
UpdateHistory
2023 Update #2: On July 15, 2023 we added 1,779 new full length (FL) and 1,410 new control region (CR) GenBank sequences to our database. This brings our total nu...
NEW - 01 Feb 2024 - 19:12 by UnknownUser
VariantSubmissionCopyArchived
(function($) { $(function() { $("#unpublishedSubmittal").validate({ submitHandler: function(form) { var variantString = ''; var url = '/mitomaster/s...
NEW - 08 Jan 2016 - 19:10 by UnknownUser
VariantSubmissionList
MITOMAP: Unpublished mtDNA Variants {ARCHIVED, no longer updated} To submit unpublished mtDNA variant data to an online database, please contact lishen #64;chla.u...
r4 - 19 Oct 2022 - 19:19 by UnknownUser
VariantSubmissionTemplate
#variantinfo { border: 1px solid #DDD; } #variantinfo th, #variantinfo td { border: 1px solid #CCC; padding: 5px; } (function($) { $(function() { /...
NEW - 21 Jun 2023 - 00:19 by UnknownUser
VariantsCoding
MITOMAP: mtDNA Coding Region RNA Sequence Variants Last Edited: Mar 04, 2024 The GB frequency data is derived from 61124 GenBank sequences with size greater tha...
r238 - 20 Apr 2024 - 05:10 by ShipingZhang
VariantsCodingIE
MITOMAP: mtDNA Coding Region RNA Sequence Variants Last Edited: Mar 04, 2024 The GB frequency data is derived from 61124 GenBank sequences with size greater th...
r234 - 20 Apr 2024 - 05:10 by ShipingZhang
VariantsCodingPurged
MITOMAP: mtDNA Coding Region RNA Sequence Variants (revised sequence set March 2019) Last Edited: Apr 20, 2024 The GB frequency data is derived from 0 GenBank s...
r236 - 20 Apr 2024 - 05:11 by ShipingZhang
VariantsCodingPurgedIE
MITOMAP: mtDNA Coding Region RNA Sequence Variants (revised sequence set March 2019) Last Edited: Apr 20, 2024 The GB frequency data is derived from 0 GenBank ...
r236 - 20 Apr 2024 - 05:11 by ShipingZhang
VariantsCodingPurgedTemplate
MITOMAP: mtDNA Coding Region RNA Sequence Variants (revised sequence set March 2019) Last Edited: MM:EditDate:MM The GB frequency data is derived from MM:Genba...
NEW - 10 Mar 2022 - 18:57 by UnknownUser
VariantsCodingSupplement
MITOMAP: mtDNA Coding Region RNA Sequence Variants (Supplemental data: excluded sequences) Last Edited: Apr 20, 2024 The data in this table is derived from 0 Ge...
r236 - 20 Apr 2024 - 05:11 by ShipingZhang
VariantsCodingSupplementIE
MITOMAP: mtDNA Coding Region RNA Sequence Variants (Supplemental data: excluded sequences) Last Edited: Apr 20, 2024 The data in this table is derived from 0 Ge...
r236 - 20 Apr 2024 - 05:11 by ShipingZhang
VariantsCodingSupplementTemplate
MITOMAP: mtDNA Coding Region RNA Sequence Variants (Supplemental data: excluded sequences) Last Edited: MM:EditDate:MM The data in this table is derived from MM...
NEW - 10 Mar 2022 - 18:57 by UnknownUser
VariantsCodingTemplate
MITOMAP: mtDNA Coding Region RNA Sequence Variants Last Edited: MM:EditDate:MM The GB frequency data is derived from MM:GenbankCnt:MM GenBank sequences with si...
NEW - 10 Mar 2022 - 18:57 by UnknownUser
VariantsControl
MITOMAP: mtDNA Control Region Sequence Variants Last Edited: Mar 04, 2024 th { text align: center; } #gb footer { font size: 12px; } .mark { color: red; ...
r238 - 20 Apr 2024 - 05:14 by ShipingZhang
VariantsControlIE
MITOMAP: mtDNA Control Region Sequence Variants Last Edited: Mar 04, 2024 Nucleotide Position Nucleotide Change GB Frequencytotal (FL/CR) Curated Referenc...
r236 - 20 Apr 2024 - 05:14 by ShipingZhang
VariantsControlTemplate
MITOMAP: mtDNA Control Region Sequence Variants Last Edited: MM:EditDate:MM Nucleotide Position Nucleotide Change GB Frequencytotal (FL/CR) Curated Refere...
NEW - 10 Mar 2022 - 18:57 by UnknownUser
WebHome
MITOMAP A human mitochondrial genome database A compendium of polymorphisms and mutations in human mitochondrial DNA MITOMAP reports published data on human mito...
r107 - 20 Apr 2024 - 05:16 by UnknownUser
XClinicalPhenotypes2
Clinical Phenotypes (non LHON) Associated with mtDNA rRNA tRNA Mutations Reported in the Literature Syndromes Locus Disease* Allele RNA Ho* He* Status** Ref...
r2 - 13 Oct 2016 - 19:01 by MarieLott
YorubanConversion
Yoruban to rCRS Conversion Human mitochondrial nucleotides are commonly identified using positions derived from the sequence first published by Anderson et al. an...
r5 - 02 Jul 2018 - 16:39 by MarieLott
mitomap_error
MITOMAP Database Rebuild: September 13, 2012 15:01:52 Deleting old data Resetting sequences Loading the new data Rebuild finished MITOMAP Wiki Rebuild: Septembe...
NEW - 17 Nov 2015 - 13:59 by UnknownUser
Number of topics: 89
Copyright © by the contributing authors. All material on this collaboration platform is the property of the contributing authors. Ideas, requests, problems regarding Foswiki? Send feedback