You are here: FoswikiMITOMAP WebToolLaunchpad (11 Feb 2019, MarieLott)


New Tools!

  • Variant Search, aka "Marker Finder"

    Search for variants found at specified frequencies in your choice of haplogroups or lineages - originally developed as a "Marker Finder" but has many uses!

  • Find Sequences for Any Haplogroup

    Retrieve haplogroup-specific GenBank sequences and their variants

  • Variant Info

    Get info for specified variants - find lineage & haplogroup-specific frequencies for both variant and rCRS alleles

Classic Tools

  • MITOMASTER

    Haplotype your sequences and get variant information - including frequencies, conservation, references, and more. Input can be sequences in FASTA format, GenBank numbers, or SNVs. The SNV query is especially useful for novel variants.

  • Allele Search

    Get info for specified variants in our database - a quick way to pull up info on general population variants and patient variants. For novel variants, use MITOMASTER's SNV search, above.

  • Sequences in our current data set

    Use the scripts and links on this page to retrieve sequence IDs from our current database, from GenBank, and elsewhere. A master list of all current variants in Mitomap may also be downloaded.

Topic revision: r1 - 11 Feb 2019, MarieLott

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