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CambridgeReanalysis
Reanalysis of the Cambridge reference sequence by resequencing the original placental mtDNA sample Table from Andrews etal (1999), with permission of the authors....
CitingMitomap
MITOMAP A human mitochondrial genome database Please use one of the following two formats to cite MITOMAP * MITOMAP: A Human Mitochondrial Genome Database. htt...
ClinicalPhenotypes1
Clinical Phenotypes (non LHON) Associated with mtDNA Polypeptide Gene Mutations Reported in the Literature Syndromes Locus Disease* Allele ...
ClinicalPhenotypesPolypeptide
Reported Mitochondrial DNA Polypeptide Gene Disease Mutations, Non LHON Last update: March 2012 Panel A: The Top Pathogenic mtDNA Polypeptide Missense Mutations, ...
ClinicalPhenotypesRNA
Clinical Phenotypes Associated with mtDNA rRNA tRNA Mutations, Non LHON Last update: March 2012 The Top mtDNA Protein Synthesis (rRNA tRNA) Gene Mutations Sy...
ComplexRearrangements
MITOMAP: mtDNA Complex Rearrangements Last Edited: Nov 21, 2003 ...
ComplexRearrangementsIE
MITOMAP: mtDNA Complex Rearrangements Last Edited: Nov 21, 2003 Parental Molecule Insert Size (bp) Apparent mtDNA Species Insert (nt) Flanking Repeats ...
ComplexRearrangementsTemplate
MITOMAP: mtDNA Complex Rearrangements Last Edited: MM:EditDate:MM Parental Molecule Insert Size (bp) Apparent mtDNA Species Insert (nt) Flanking Repeats...
ContinentVariants
MITOMAP: Common Continent Specific mtDNA Variants Last Edited: Jun 01, 2003 ...
ContinentVariantsIE
MITOMAP: Common Continent Specific mtDNA Variants Last Edited: Jun 01, 2003 Haplogroup Continent mtDNA Variants Continental mtDNA AFRICA L 3592 HpaI 7...
ContinentVariantsTemplate
MITOMAP: Common Continent Specific mtDNA Variants Last Edited: MM:EditDate:MM Haplogroup Continent mtDNA Variants Continental mtDNA MM:TableData:MM Note...
DeletionsMultiple
MITOMAP: Reported Multiple mtDNA Deletions Within Individuals Last Edited: May 25, 2012 ...
DeletionsMultipleIE
MITOMAP: Reported Multiple mtDNA Deletions Within Individuals Last Edited: May 25, 2012 Deletion Junction (nt:nt) Deletion Size(bp) Repeat Type Repeat Loc...
DeletionsMultipleTemplate
MITOMAP: Reported Multiple mtDNA Deletions Within Individuals Last Edited: MM:EditDate:MM Deletion Junction (nt:nt) Deletion Size(bp) Repeat Type Repeat L...
DiseaseList
MITOMAP Disease Listing / Allele Classification with links to OMIM AD: Alzheimer's Disease ADPD: Alzheimer's Disease and Parkinsons's Disease AMDF: Ataxia, M...
GenomeLoci
MITOMAP: Mitochondrial DNA Function Locations Last Edited: Sep 16, 2015 ...
GenomeLociIE
MITOMAP: Mitochondrial DNA Function Locations Last Edited: Sep 16, 2015 Map Locus Starting Ending Shorthand Description Reference MT OHR57 57 57 CR...
GenomeLociTemplate
MITOMAP: Mitochondrial DNA Function Locations Last Edited: MM:EditDate:MM Map Locus Starting Ending Shorthand Description Reference MM:TableData:MM ...
HaplogroupFreqs
Estimated Worldwide Haplotype Frequencies (%) Compiled by O. Derbeneva 2009 Please note: These numbers are simple means for published frequencies, not always have...
HaplogroupInfo
Haplogroup Information
HumanMitoCode
The Human Mitochondrial Genetic Code Translations: ATP6, ATP8, ND1, ND2, ND3, ND4, ND4L, ND5, ND6, CO1, CO2, CO3, CytB. Phe F UUUUUC Thr T ...
HumanMitoReport
The Report of the Committee on the Human Mitochondrial Genome Adapted from the original print report: Wallace DC, Lott MT, Brown MD, Huoponen K, Torroni A 1995. R...
HumanMitoSeq
.error { color:red; background color: #FFFF00; } .rare { color:green; background color: #FFFF00; } Revised Cambridge Reference Sequence (rCRS) ...
HumanMitoSeq2Strands
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HumanMitoStrands
Human Mitochondrial DNA H L Strands Explained The rCRS (NC_012920 ) and the original CRS (J01415.1) are sequences are described as being the "L strand". The fol...
InsertionsSimple
MITOMAP: mtDNA Simple Insertions Last Edited: May 02, 2008 ...
InsertionsSimpleIE
MITOMAP: mtDNA Simple Insertions Last Edited: May 02, 2008 Parental Molecule Insert Size (bp) Insert (nt) Insert Point (nt) Flanking Repeats N Refe...
InsertionsSimpleTemplate
MITOMAP: mtDNA Simple Insertions Last Edited: MM:EditDate:MM Parental Molecule Insert Size (bp) Insert (nt) Insert Point (nt) Flanking Repeats N Re...
LeberDiseaseMutations
Leber's Hereditary Optic Neuropathy (LHON) Disease Mutations A. "Top 10" Primary LHON mutations, the first 3 mutations listed (in boldface) represent approximatel...
LocusATP6
The Amino Acids of mtATP6 (8527 9207) 8535 8544 8553 8562 8571 8580 5' ATG AAC GAA AAT CTG TTC GCT TCA TTC ATT GCC ...
LocusATP8
The Amino Acids of mtATP8 (8366 8572) 8374 8383 8392 8401 8410 8419 5' ATG CCC CAA CTA AAT ACT ACC GTA TGG CCC ACC ...
LocusCO1
The Amino Acids of mtCO1 (5904 7445) 5912 5921 5930 5939 5948 5957 5' ATG TTC GCC GAC CGT TGA CTA TTC TCT ACA AAC...
LocusCO2
The Amino Acids of mtCO2 (7586 8269) 7594 7603 7612 7621 7630 7639 5' ATG GCA CAT GCA GCG CAA GTA GGT CTA CAA GAC...
LocusCO3
The Amino Acids of mtCO3 (9207 9990) 9215 9224 9233 9242 9251 9260 5' ATG ACC CAC CAA TCA CAT GCC TAT CAT ATA GTA...
LocusCytB
The Amino Acids of mtCytB (14747 15887) 14755 14764 14773 14782 14791 14800 5' ATG ACC CCA ATA CGC AAA ACT AAC CCC CTA ...
LocusND1
The Amino Acids of mtND1 (3307 4262) 3315 3324 3333 3342 3351 3360 5' ATA CCC ATG GCC AAC CTC CTA CTC CTC ATT GTA C...
LocusND2
The Amino Acids of mtND2 (4470 5511) 4478 4487 4496 4505 4514 4523 5' ATT AAT CCC CTG GCC CAA CCC GTC ATC TAC TCT A...
LocusND3
The Amino Acids of mtND3 (10059 10404) 10067 10076 10085 10094 10103 10112 5' ATA AAC TTC GCC TTA ATT TTA ATA ATC AAC ACC...
LocusND4
The Amino Acids of mtND4 (10760 12137) 10768 10777 10786 10795 10804 10813 5' ATG CTA AAA CTA ATC GTC CCA ACA ATT ATA T...
LocusND4L
The Amino Acids of mtND4L (10470 10766) 10478 10487 10496 10505 10514 10523 5' ATG CCC CTC ATT TAC ATA AAT ATT ATA CTA ...
LocusND5
The Amino Acids of mtND5 (12337 14148) 12345 12354 12363 12372 12381 12390 5' ATA ACC ATG CAC ACT ACT ATA ACC ACC CTA A...
LocusND6
The Amino Acids of mtND6 (14149 14673) Reminder: mtND6 is transcribed off of the reverse strand, beginning at 14673. * N G R A I E I V I ...
MitoDiseases
MITOMAP Disease Listing / Allele Classification with links to OMIM AD: Alzheimer's Disease ADPD: Alzheimer's Disease and Parkinsons's Disease AMDF: Ataxia, Myoclo...
MitoPolypeptide
MITOMAP: Mitochondrial DNA Polypeptide Assignments Last Edited: Mar 09, 2004 ...
MitoPolypeptideIE
MITOMAP: Mitochondrial DNA Polypeptide Assignments Last Edited: Mar 09, 2004 Locus Predicted Mol. Wt. SDS PAGE MobilityTris glycine Number SDS PAGE Mobili...
MitoPolypeptideTemplate
MITOMAP: Mitochondrial DNA Polypeptide Assignments Last Edited: MM:EditDate:MM Locus Predicted Mol. Wt. SDS PAGE MobilityTris glycine Number SDS PAGE Mobi...
MitoSeqs
Complete Mitochondrial DNA Sequences The revised Cambridge Reference Sequence (rCRS) is GenBank number NC_012920. Please use this new number when citing the rCRS ...
MitoSites
MitoSites Mitochondrial Resources on the Web C. elegans Mitochondrial Directory (UK) Complex I Database (Scripps) DNA Polymerase Gamma Mutation Database EMPOP Co...
MitomapFigures
MITOMAP Figures The following figures require Adobe Acrobat Reader. Click here to download. Figure 1: Mitochondrial DNA Map Figure 2: Eleven pathological mutat...
MoleDay
October 23rd is being celebrated as "*Mole Day*" by chemists. A mole is a group of atoms or molecules which number 6.02 times 10 to the 23rd power. For any chemi...
MutationsCodingControl
MITOMAP: Reported Mitochondrial DNA Base Substitution Diseases: Coding and Control Region Point Mutations Last Edited: Nov 30, 2017 The GB frequency data in Mitom...
MutationsCodingControlIE
MITOMAP: Reported Mitochondrial DNA Base Substitution Diseases: Coding and Control Region Point Mutations Last Edited: Nov 30, 2017 The GB frequency data in Mitom...
MutationsCodingControlTemplate
MITOMAP: Reported Mitochondrial DNA Base Substitution Diseases: Coding and Control Region Point Mutations Last Edited: MM:EditDate:MM The GB frequency data in Mit...
MutationsLHON
DIV.Section1 { page: Section1 } Leber's Hereditary Optic Neuropathy (LHON) Disease Mutations A. "Top 18" Primary LHON mutations, the first 3 mutations listed...
MutationsRNA
MITOMAP: Reported Mitochondrial DNA Base Substitution Diseases: rRNA/tRNA mutations Last Edited: Nov 27, 2017 The GB frequency data in Mitomap is derived from 37...
MutationsRNAIE
MITOMAP: Reported Mitochondrial DNA Base Substitution Diseases: rRNA/tRNA mutations Last Edited: Nov 27, 2017 The GB frequency data in Mitomap is derived from 37...
MutationsRNATemplate
MITOMAP: Reported Mitochondrial DNA Base Substitution Diseases: rRNA/tRNA mutations Last Edited: MM:EditDate:MM The GB frequency data in Mitomap is derived from ...
MutationsSomatic
MITOMAP: mtDNA Somatic Mutations Last Edited: Apr 26, 2016 ...
MutationsSomaticIE
MITOMAP: mtDNA Somatic Mutations Last Edited: Apr 26, 2016 Locus Nucleotide Position Nucleotide Change Amino Acid Change Homo plasmy Hetero Plasmy ...
MutationsSomaticTemplate
MITOMAP: mtDNA Somatic Mutations Last Edited: MM:EditDate:MM Locus Nucleotide Position Nucleotide Change Amino Acid Change Homo plasmy Hetero Plasmy...
NetWatch1999
NetWatch http://www.sciencemag.org/content/vol283/issue5407/netwatch.dtl Volume 283, Number 5407, Issue of 05 March 1999 2005 by The American Associatio...
NuclearGenesNonStructural
Non Structural Nuclear Genes in Mitochondrial Disease Last update: March 2012 Complex Assembly Complex Name OMIM Function Chromosome I...
NuclearGenesStructural
Structural Nuclear Genes in Mitochondrial Disease Last update: March 2012 Complex Name OMIM Function Chromosome Inheritance Clinica...
NumtChr1
Mitochondrial DNA like sequences in the nucleus (NUMTs)1 Chromosome 1 Celera Scaffold and Genbank accession numbers are indicated for each NUMT containing contig....
PolymorphismsCoding
MITOMAP: mtDNA Coding Region RNA Sequence Variants Last Edited: Sep 18, 2017 The GB frequency data is derived from 37545 GenBank sequences with size greater tha...
PolymorphismsCodingIE
MITOMAP: mtDNA Coding Region RNA Sequence Variants Last Edited: Sep 18, 2017 The GB frequency data is derived from 37545 GenBank sequences with size greater th...
PolymorphismsCodingJS
MITOMAP: mtDNA Coding Region RNA Sequence Variants Last Edited: Aug 27, 2013 The new GB frequency data is derived from 18363 GenBank sequences with size greater...
PolymorphismsCodingTemplate
MITOMAP: mtDNA Coding Region RNA Sequence Variants Last Edited: MM:EditDate:MM The GB frequency data is derived from MM:GenbankCnt:MM GenBank sequences with si...
PolymorphismsControl
MITOMAP: mtDNA Control Region Sequence Variants Last Edited: Sep 18, 2017 The GB frequency data is derived from 37545 GenBank sequences with size greater than 15....
PolymorphismsControlIE
MITOMAP: mtDNA Control Region Sequence Variants Last Edited: Sep 18, 2017 The GB frequency data is derived from 37545 GenBank sequences with size greater than 15....
PolymorphismsControlTemplate
MITOMAP: mtDNA Control Region Sequence Variants Last Edited: MM:EditDate:MM The GB frequency data is derived from MM:GenbankCnt:MM GenBank sequences with size gre...
PseudogeneList
Mitochondrial DNA like sequences in the nucleus (NUMTs) Nuclear mitochondrial DNA sequences (NUMTs) are common in eukaryotes. Human mtDNA sequences are listed bel...
ReferenceList
References of Mitochondrial Interest This page is part of Mitomap. Date of last update: 13 November 2017. If you would like to submit published articles to b...
Resources
Resources and Downloads A daily dump of the mitomap schema is available here: * http://mitomap.org/downloads/mitomap.dump.sql.gz There are also feeds of th...
RestrictionSitesHigh
MITOMAP: Polymorphic mtDNA High Resolution Restriction Sites Detected by High Resolution Screening of Human Populations Last Edited: Jun 01, 2003 This page is n...
RestrictionSitesHighIE
MITOMAP: Polymorphic mtDNA High Resolution Restriction Sites Detected by High Resolution Screening of Human Populations Last Edited: Jun 01, 2003 This page is n...
RestrictionSitesHighTemplate
MITOMAP: Polymorphic mtDNA High Resolution Restriction Sites Detected by High Resolution Screening of Human Populations Last Edited: MM:EditDate:MM This page is...
RestrictionSitesLow
MITOMAP: Polymorphic MtDNA Low Resolution Restriction Sites Detected by Low Resolution Screening of Human Populations This page is no longer maintained. ...
RestrictionSitesLowIE
MITOMAP: Polymorphic MtDNA Low Resolution Restriction Sites Detected by Low Resolution Screening of Human Populations This page is no longer maintained. Last Ed...
RestrictionSitesLowTemplate
MITOMAP: Polymorphic MtDNA Low Resolution Restriction Sites Detected by Low Resolution Screening of Human Populations This page is no longer maintained. Last Ed...
SequentialMutationalTree
MITOMAP Sequential Mutational Trees * mitomap phylogeny.pdf: This is a typo corrected version of the Sequential Mutational Tree published in 2006
TestADataForm
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TreeBibliography
Bibliography for MITOMAP's Large Phylogenetic Tree 9/25/2006 1, Mishmar D, Ruiz Pesini E, Golik P, Macaulay V, Clark AG, Hosseini S, Brandon M, Easley K, Ch...
VariantSubmissionList
MITOMAP: Unpublished mtDNA Variants Also see the submission index. To submit new unpublished variants, please log in and useTo submit new unpublished variants,...
VariationInversions
MITOMAP: Reported mtDNA Pathogenic Inversion(s) Last edited: 11/08/2001 Inversion Start (nt) Inversion Stop (nt) Inversion Size (bp) Gene(s) Affected Am...
XClinicalPhenotypes2
Clinical Phenotypes (non LHON) Associated with mtDNA rRNA tRNA Mutations Reported in the Literature Syndromes Locus Disease* Allele RNA Ho* He* Status** Ref...
XPhyloTree
XPhyloTree XOXO Format The tree below is an adaptation of XPhyloTree Build 4 in which the file format has been altered to reduce the size and increase machine rea...
YorubanConversion
Yoruban to rCRS Conversion Human mitochondrial nucleotides are commonly identified using positions derived from the sequence first published by Anderson et al. an...
Number of topics: 89
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